Protein–RNA interactions for Protein: O75962

TRIO, Triple functional domain protein, humanhuman

Predictions only

Length 3,097 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOO75962 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.24□□□□□ -0.13
TRIOO75962 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIOO75962 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIOO75962 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRIOO75962 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIOO75962 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.24□□□□□ -0.13
TRIOO75962 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRIOO75962 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRIOO75962 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 WDR54-202ENST00000409791 854 ntTSL 3 BASIC14.23□□□□□ -0.13
TRIOO75962 AC100858.1-201ENST00000514059 1228 ntBASIC14.23□□□□□ -0.13
TRIOO75962 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 RN7SL480P-201ENST00000581481 294 ntBASIC14.23□□□□□ -0.13
TRIOO75962 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC14.23□□□□□ -0.13
TRIOO75962 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIOO75962 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRIOO75962 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 AC005722.1-201ENST00000431878 964 ntBASIC14.23□□□□□ -0.13
TRIOO75962 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
TRIOO75962 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.23□□□□□ -0.13
TRIOO75962 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TRIOO75962 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 SNRPCP15-201ENST00000424055 192 ntBASIC14.23□□□□□ -0.13
TRIOO75962 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIOO75962 RNF7-205ENST00000480908 782 ntTSL 4 BASIC14.23□□□□□ -0.13
TRIOO75962 AL450346.2-201ENST00000495602 1024 ntBASIC14.23□□□□□ -0.13
TRIOO75962 SRPK2P-201ENST00000523408 1100 ntBASIC14.23□□□□□ -0.13
TRIOO75962 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIOO75962 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.23□□□□□ -0.13
TRIOO75962 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRIOO75962 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TRIOO75962 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRIOO75962 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 AC106785.2-201ENST00000564385 1319 ntBASIC14.22□□□□□ -0.13
TRIOO75962 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRIOO75962 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIOO75962 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.22□□□□□ -0.13
TRIOO75962 TPT1P9-201ENST00000413759 514 ntBASIC14.22□□□□□ -0.13
TRIOO75962 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 AL161932.2-201ENST00000435436 679 ntBASIC14.22□□□□□ -0.13
TRIOO75962 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIOO75962 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.22□□□□□ -0.13
TRIOO75962 BX322562.1-201ENST00000617004 561 ntBASIC14.22□□□□□ -0.13
TRIOO75962 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIOO75962 AL590556.2-202ENST00000636906 844 ntBASIC14.22□□□□□ -0.13
TRIOO75962 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.22□□□□□ -0.13
TRIOO75962 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 Z98885.3-201ENST00000624882 1757 ntBASIC14.22□□□□□ -0.13
TRIOO75962 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC14.22□□□□□ -0.13
TRIOO75962 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.22□□□□□ -0.13
TRIOO75962 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRIOO75962 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.22□□□□□ -0.13
TRIOO75962 MT3-202ENST00000561640 514 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms