Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RPL18AP8-201ENST00000486071 528 ntBASIC16.5■□□□□ 0.23
ATP2A1O14983 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.5■□□□□ 0.23
ATP2A1O14983 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
ATP2A1O14983 LINC01815-202ENST00000641468 1409 ntBASIC16.5■□□□□ 0.23
ATP2A1O14983 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ATP2A1O14983 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ATP2A1O14983 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.5■□□□□ 0.23
ATP2A1O14983 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2A1O14983 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2A1O14983 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 AP000911.2-201ENST00000534330 502 ntBASIC16.49■□□□□ 0.23
ATP2A1O14983 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.49■□□□□ 0.23
ATP2A1O14983 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ATP2A1O14983 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ATP2A1O14983 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP2A1O14983 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP2A1O14983 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.48■□□□□ 0.23
ATP2A1O14983 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 AC079112.1-201ENST00000454972 939 ntBASIC16.48■□□□□ 0.23
ATP2A1O14983 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms