Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SDCBPO00560 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
SDCBPO00560 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SDCBPO00560 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SDCBPO00560 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SDCBPO00560 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SDCBPO00560 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SDCBPO00560 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.41□□□□□ -0.42
SDCBPO00560 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.41□□□□□ -0.42
SDCBPO00560 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SDCBPO00560 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 KRT8P35-201ENST00000483942 1338 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
SDCBPO00560 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.4□□□□□ -0.42
SDCBPO00560 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SDCBPO00560 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 ACTBP8-201ENST00000403258 1108 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 WASH4P-201ENST00000564273 1246 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC009486.1-201ENST00000569860 813 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.4□□□□□ -0.42
SDCBPO00560 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.4□□□□□ -0.42
SDCBPO00560 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SDCBPO00560 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 AL445209.1-201ENST00000607269 3491 ntBASIC12.4□□□□□ -0.42
SDCBPO00560 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SDCBPO00560 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SDCBPO00560 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.39□□□□□ -0.43
SDCBPO00560 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 ACKR1-201ENST00000368121 1240 ntBASIC12.39□□□□□ -0.43
SDCBPO00560 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.39□□□□□ -0.43
SDCBPO00560 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.39□□□□□ -0.43
SDCBPO00560 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.39□□□□□ -0.43
SDCBPO00560 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.39□□□□□ -0.43
SDCBPO00560 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.39□□□□□ -0.43
SDCBPO00560 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.39□□□□□ -0.43
SDCBPO00560 MIR6074-201ENST00000612054 107 ntBASIC12.39□□□□□ -0.43
SDCBPO00560 AL033527.5-201ENST00000641382 801 ntBASIC12.39□□□□□ -0.43
SDCBPO00560 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SDCBPO00560 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms