Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.48■□□□□ 0.07
FOXN3O00409 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 FAM58BP-201ENST00000439056 645 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 AC012441.2-201ENST00000444843 739 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 AC003686.1-201ENST00000550956 1034 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.48■□□□□ 0.07
FOXN3O00409 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.48■□□□□ 0.07
FOXN3O00409 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.48■□□□□ 0.07
FOXN3O00409 AC133552.6-201ENST00000613406 534 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 BAP1-211ENST00000615113 489 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
FOXN3O00409 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 FAM90A12P-201ENST00000519497 2375 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 FAM90A24P-201ENST00000520792 2369 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 AC015818.8-201ENST00000587907 1519 ntBASIC15.48■□□□□ 0.07
FOXN3O00409 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
FOXN3O00409 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
FOXN3O00409 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FOXN3O00409 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
FOXN3O00409 KRT223P-202ENST00000449164 1292 ntBASIC15.47■□□□□ 0.07
FOXN3O00409 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.47■□□□□ 0.07
FOXN3O00409 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.47■□□□□ 0.07
FOXN3O00409 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.47■□□□□ 0.07
FOXN3O00409 AC124068.2-201ENST00000569473 1109 ntBASIC15.47■□□□□ 0.07
FOXN3O00409 AC021016.3-201ENST00000608367 477 ntBASIC15.47■□□□□ 0.07
FOXN3O00409 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.47■□□□□ 0.07
FOXN3O00409 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
FOXN3O00409 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
FOXN3O00409 AL928654.5-201ENST00000624831 2501 ntBASIC15.47■□□□□ 0.07
FOXN3O00409 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
FOXN3O00409 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.46■□□□□ 0.07
FOXN3O00409 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
FOXN3O00409 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms