Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 AC140479.7-201ENST00000636301 2332 ntBASIC15.99■□□□□ 0.15
LOC285556D6RIA3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.99■□□□□ 0.15
LOC285556D6RIA3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC008741.2-201ENST00000612792 3115 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 FMO6P-201ENST00000236166 1620 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC097359.2-201ENST00000604992 2389 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 NRADDP-202ENST00000641269 1585 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC064850.1-201ENST00000413279 1398 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 SNU13-204ENST00000402458 462 ntTSL 3 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 RPSAP12-201ENST00000435879 888 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC025594.1-201ENST00000469533 543 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 AC120498.7-201ENST00000562876 330 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 FBXO36P1-201ENST00000579006 471 ntBASIC15.98■□□□□ 0.15
LOC285556D6RIA3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LOC285556D6RIA3 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC020931.1-201ENST00000589622 1346 ntBASIC15.97■□□□□ 0.15
LOC285556D6RIA3 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.97■□□□□ 0.15
LOC285556D6RIA3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AL136084.1-201ENST00000449172 318 ntBASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC078814.4-201ENST00000546650 327 ntBASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.97■□□□□ 0.15
LOC285556D6RIA3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LOC285556D6RIA3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LOC285556D6RIA3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LOC285556D6RIA3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms