Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 AC023024.2-201ENST00000623561 1993 ntBASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM88BA6NKF7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM88BA6NKF7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM88BA6NKF7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
TMEM88BA6NKF7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AC007881.1-201ENST00000437460 187 ntBASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 RN7SL87P-201ENST00000497657 288 ntBASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 AL049840.2-201ENST00000602722 535 ntBASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM88BA6NKF7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 HNRNPABP1-201ENST00000406003 734 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 WDR54-202ENST00000409791 854 ntTSL 3 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 RN7SL794P-201ENST00000469816 280 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 AC099343.1-201ENST00000513481 609 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 IGHVII-74-1-201ENST00000517572 241 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ABCC6P2-201ENST00000526069 590 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 AC097474.1-201ENST00000506481 1371 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms