Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AC009955.4-201ENST00000597192 544 ntBASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AC022364.1-202ENST00000617468 2409 ntBASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRAPPC1Q9Y5R8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 LINC02486-201ENST00000604157 3000 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC108073.2-201ENST00000464002 357 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC092364.2-202ENST00000597012 1073 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AC006011.2-201ENST00000621313 1158 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AL161645.1-201ENST00000622716 1255 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 ABCD1P2-201ENST00000429313 1601 ntBASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRAPPC1Q9Y5R8 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TRAPPC1Q9Y5R8 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms