Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 AC068760.1-201ENST00000493579 1953 ntBASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 CD8B2-202ENST00000417670 633 ntBASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 COX5BP1-201ENST00000507622 393 ntBASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 KRT90P-201ENST00000549264 1064 ntBASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 RN7SL713P-201ENST00000582127 302 ntBASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF11Q9Y3C5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 FAM90A12P-201ENST00000519497 2375 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 FAM90A24P-201ENST00000520792 2369 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 COX5BP8-201ENST00000416911 349 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 ARSEP1-201ENST00000420443 635 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AL358472.5-202ENST00000641448 1267 ntBASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF11Q9Y3C5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms