Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC19.32■□□□□ 0.68
PHF8Q9UPP1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AC022080.1-201ENST00000366255 781 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 PGAM1P11-201ENST00000416729 680 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AC104961.1-201ENST00000427605 771 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SERBP1P2-201ENST00000436888 1164 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 GOLGA2P8-201ENST00000505201 779 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 BAK1P2-201ENST00000532665 631 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AC018846.1-201ENST00000568231 183 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 TYMSP2-201ENST00000589501 424 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 AC006486.2-201ENST00000624246 2199 ntBASIC19.31■□□□□ 0.68
PHF8Q9UPP1 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PHF8Q9UPP1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 NHP2P1-201ENST00000335274 462 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 ABCD1P4-201ENST00000399687 604 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AC092896.1-201ENST00000465850 380 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 RN7SL121P-201ENST00000584223 273 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 AC139713.2-207ENST00000641556 1292 ntBASIC19.3■□□□□ 0.68
PHF8Q9UPP1 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PHF8Q9UPP1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms