Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 AC018442.1-201ENST00000421439 2061 ntBASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HDAC6Q9UBN7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AC239868.1-201ENST00000369385 493 ntBASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AL645933.1-201ENST00000440087 609 ntBASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AC131206.1-201ENST00000538078 1211 ntBASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AC018635.2-201ENST00000608625 364 ntBASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 KRT8P21-201ENST00000430398 1491 ntBASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HDAC6Q9UBN7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
HDAC6Q9UBN7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HDAC6Q9UBN7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HDAC6Q9UBN7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 TBC1D3J-201ENST00000620719 1426 ntBASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 FGFR3P1-201ENST00000449999 601 ntBASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 LDHBP1-201ENST00000455730 1119 ntBASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 MIR3147-201ENST00000577811 66 ntBASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 MIR7845-201ENST00000618396 99 ntBASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.39■□□□□ 0.21
HDAC6Q9UBN7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms