Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 Z98259.2-201ENST00000641583 609 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AC018735.1-201ENST00000437208 1502 ntBASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.09□□□□□ -0.15
CUEDC1Q9NWM3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 AC090505.1-201ENST00000430515 1834 ntBASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CUEDC1Q9NWM3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RNMTL1P1-201ENST00000454103 560 ntBASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AC027237.1-201ENST00000560942 655 ntBASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AC005962.1-201ENST00000584100 773 ntBASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AL008718.2-201ENST00000609206 1313 ntBASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CUEDC1Q9NWM3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CUEDC1Q9NWM3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms