Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 KRT8P28-201ENST00000433288 1390 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 AL391825.1-201ENST00000457671 1364 ntBASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
HDHD3Q9BSH5 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AL445209.1-201ENST00000607269 3491 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AC138969.2-201ENST00000532739 9932 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AC087499.6-201ENST00000411576 835 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 FTLP10-202ENST00000505798 471 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 RNA5SP421-201ENST00000516864 134 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 API5-211ENST00000534695 560 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AC068760.1-201ENST00000493579 1953 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 NUTM2HP-201ENST00000442076 2498 ntBASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HDHD3Q9BSH5 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HDHD3Q9BSH5 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HDHD3Q9BSH5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms