Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NPAS2Q99743 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NPAS2Q99743 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
NPAS2Q99743 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.27□□□□□ -0.12
NPAS2Q99743 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.27□□□□□ -0.12
NPAS2Q99743 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 AGAP10P-201ENST00000454844 2418 ntBASIC14.27□□□□□ -0.12
NPAS2Q99743 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.27□□□□□ -0.12
NPAS2Q99743 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
NPAS2Q99743 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
NPAS2Q99743 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
NPAS2Q99743 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NPAS2Q99743 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.27□□□□□ -0.12
NPAS2Q99743 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.27□□□□□ -0.12
NPAS2Q99743 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NPAS2Q99743 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ACKR1-201ENST00000368121 1240 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.27□□□□□ -0.13
NPAS2Q99743 BNIP3P42-201ENST00000454982 569 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 CTBP2P5-201ENST00000454986 1264 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 AP005482.1-201ENST00000563722 1273 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 BNIP3P29-201ENST00000598302 571 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 AC244669.2-201ENST00000612320 853 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 AC011447.5-201ENST00000616168 564 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 AC090643.2-201ENST00000623442 2029 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 AC215219.1-201ENST00000400706 1817 ntBASIC14.27□□□□□ -0.13
NPAS2Q99743 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NPAS2Q99743 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NPAS2Q99743 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.27□□□□□ -0.13
NPAS2Q99743 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPAS2Q99743 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 MIR497HG-202ENST00000572453 3838 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 AC015909.5-201ENST00000624336 2266 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPAS2Q99743 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.26□□□□□ -0.13
NPAS2Q99743 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPAS2Q99743 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.26□□□□□ -0.13
NPAS2Q99743 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPAS2Q99743 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.26□□□□□ -0.13
NPAS2Q99743 AL355864.2-201ENST00000447420 863 ntBASIC14.26□□□□□ -0.13
NPAS2Q99743 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NPAS2Q99743 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
NPAS2Q99743 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.26□□□□□ -0.13
NPAS2Q99743 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms