Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC012617.1-204ENST00000586340 2305 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC079325.1-201ENST00000430386 857 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC12□□□□□ -0.49
CSMD1Q96PZ7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 POR-201ENST00000394893 2532 ntTSL 5 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD1Q96PZ7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12□□□□□ -0.49
CSMD1Q96PZ7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CICP14-201ENST00000629111 2732 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 HNRNPA1P10-201ENST00000444945 962 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SNRPD2P2-201ENST00000473818 333 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CAP2-207ENST00000493172 861 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AC091769.1-201ENST00000619576 568 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AC026336.4-201ENST00000624565 1050 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CDKN2A-AS1-201ENST00000441769 823 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 NRADDP-201ENST00000437305 691 ntBASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD1Q96PZ7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms