Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-CQ95604 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-CQ95604 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AL359092.2-201ENST00000423330 585 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 RPSAP12-201ENST00000435879 888 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 AC133141.1-201ENST00000443015 339 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 SNRPD2P2-201ENST00000473818 333 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 DPY19L2P4-201ENST00000479881 442 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-CQ95604 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-CQ95604 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-CQ95604 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC005586.2-201ENST00000563946 837 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-CQ95604 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 AC113385.2-201ENST00000614465 762 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 AC126755.5-201ENST00000622756 267 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.73□□□□□ -0.05
HLA-CQ95604 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HLA-CQ95604 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-CQ95604 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-CQ95604 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-CQ95604 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
HLA-CQ95604 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HLA-CQ95604 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-CQ95604 HLA-DMA-202ENST00000395303 1007 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 ACTBP14-201ENST00000411655 1089 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HLA-CQ95604 SLC25A15P1-201ENST00000456738 342 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-CQ95604 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AC005746.3-201ENST00000614751 393 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-CQ95604 AC005865.2-202ENST00000635814 725 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 LINC02199-201ENST00000506655 2702 ntBASIC14.72□□□□□ -0.05
HLA-CQ95604 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms