Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AC012441.2-201ENST00000444843 739 ntBASIC15.34■□□□□ 0.05
ATP2A3Q93084 IMP3P2-201ENST00000489760 475 ntBASIC15.34■□□□□ 0.05
ATP2A3Q93084 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 AC132192.2-201ENST00000596206 1147 ntBASIC15.34■□□□□ 0.05
ATP2A3Q93084 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.34■□□□□ 0.05
ATP2A3Q93084 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ATP2A3Q93084 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.34■□□□□ 0.05
ATP2A3Q93084 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.33■□□□□ 0.05
ATP2A3Q93084 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATP2A3Q93084 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATP2A3Q93084 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ATP2A3Q93084 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.33■□□□□ 0.05
ATP2A3Q93084 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ATP2A3Q93084 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATP2A3Q93084 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ATP2A3Q93084 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC018442.1-201ENST00000421439 2061 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 PUDPP3-201ENST00000445368 636 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC125604.1-201ENST00000496255 707 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC024681.1-201ENST00000521917 487 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC016629.1-201ENST00000596579 586 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC008132.1-202ENST00000342005 1389 ntBASIC15.33■□□□□ 0.04
ATP2A3Q93084 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATP2A3Q93084 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP2A3Q93084 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP2A3Q93084 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms