Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CPEB3Q8NE35 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 BRWD1P1-201ENST00000401091 371 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 BTBD6P1-201ENST00000412176 1267 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AL096828.3-201ENST00000615354 462 ntBASIC12.72□□□□□ -0.37
CPEB3Q8NE35 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.72□□□□□ -0.37
CPEB3Q8NE35 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.71□□□□□ -0.37
CPEB3Q8NE35 PFN1P12-201ENST00000455938 534 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms