Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RTTNQ86VV8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.91□□□□□ -0.34
RTTNQ86VV8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AC073869.1-201ENST00000415574 2762 ntBASIC12.91□□□□□ -0.34
RTTNQ86VV8 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 MIR33B-201ENST00000385104 96 ntBASIC12.91□□□□□ -0.34
RTTNQ86VV8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AC005730.2-201ENST00000564549 1184 ntBASIC12.91□□□□□ -0.34
RTTNQ86VV8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AC139712.1-201ENST00000378256 1875 ntBASIC12.91□□□□□ -0.34
RTTNQ86VV8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.91□□□□□ -0.34
RTTNQ86VV8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RTTNQ86VV8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 AC026434.2-201ENST00000506094 1078 ntBASIC12.9□□□□□ -0.34
RTTNQ86VV8 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 GCOM2-201ENST00000509133 1104 ntBASIC12.9□□□□□ -0.34
RTTNQ86VV8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.9□□□□□ -0.34
RTTNQ86VV8 AGGF1P1-201ENST00000509500 2073 ntBASIC12.9□□□□□ -0.34
RTTNQ86VV8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RTTNQ86VV8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms