Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARS2Q5ST30 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC092580.1-201ENST00000433998 658 ntBASIC15.38■□□□□ 0.05
VARS2Q5ST30 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 RN7SL277P-201ENST00000481521 288 ntBASIC15.38■□□□□ 0.05
VARS2Q5ST30 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC109466.1-206ENST00000522686 774 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC005586.2-201ENST00000563946 837 ntBASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC021016.3-201ENST00000608367 477 ntBASIC15.38■□□□□ 0.05
VARS2Q5ST30 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AC215219.1-201ENST00000400706 1817 ntBASIC15.38■□□□□ 0.05
VARS2Q5ST30 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VARS2Q5ST30 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AGGF1P1-201ENST00000509500 2073 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 KRT8P31-201ENST00000504812 1408 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 TNRC18P2-201ENST00000417666 2714 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 MIR557-201ENST00000385239 98 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 MTCO2P3-201ENST00000442543 421 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 DUTP3-201ENST00000450025 415 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VARS2Q5ST30 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC034229.4-201ENST00000607861 441 ntBASIC15.37■□□□□ 0.05
VARS2Q5ST30 AC073352.2-201ENST00000609385 439 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms