Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.9■□□□□ 0.14
KCNA1Q09470 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.9■□□□□ 0.14
KCNA1Q09470 PFN1P12-201ENST00000455938 534 ntBASIC15.9■□□□□ 0.14
KCNA1Q09470 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.9■□□□□ 0.14
KCNA1Q09470 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.9■□□□□ 0.14
KCNA1Q09470 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.9■□□□□ 0.14
KCNA1Q09470 AC124068.2-201ENST00000569473 1109 ntBASIC15.9■□□□□ 0.14
KCNA1Q09470 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 AP000346.4-201ENST00000614827 381 ntBASIC15.9■□□□□ 0.14
KCNA1Q09470 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.9■□□□□ 0.14
KCNA1Q09470 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.9■□□□□ 0.14
KCNA1Q09470 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.9■□□□□ 0.14
KCNA1Q09470 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KCNA1Q09470 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
KCNA1Q09470 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.14
KCNA1Q09470 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
KCNA1Q09470 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.89■□□□□ 0.13
KCNA1Q09470 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
KCNA1Q09470 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.89■□□□□ 0.13
KCNA1Q09470 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 PGAM1P5-201ENST00000548011 764 ntBASIC15.89■□□□□ 0.13
KCNA1Q09470 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 RN7SL163P-201ENST00000583100 276 ntBASIC15.89■□□□□ 0.13
KCNA1Q09470 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.89■□□□□ 0.13
KCNA1Q09470 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.89■□□□□ 0.13
KCNA1Q09470 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.89■□□□□ 0.13
KCNA1Q09470 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.89■□□□□ 0.13
KCNA1Q09470 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KCNA1Q09470 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.89■□□□□ 0.13
KCNA1Q09470 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.88■□□□□ 0.13
KCNA1Q09470 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.88■□□□□ 0.13
KCNA1Q09470 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.88■□□□□ 0.13
KCNA1Q09470 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.88■□□□□ 0.13
KCNA1Q09470 XBP1P1-201ENST00000436573 652 ntBASIC15.88■□□□□ 0.13
KCNA1Q09470 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.88■□□□□ 0.13
KCNA1Q09470 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.88■□□□□ 0.13
KCNA1Q09470 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.88■□□□□ 0.13
KCNA1Q09470 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.88■□□□□ 0.13
KCNA1Q09470 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.88■□□□□ 0.13
KCNA1Q09470 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KCNA1Q09470 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.88■□□□□ 0.13
KCNA1Q09470 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms