Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CD47Q08722 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CD47Q08722 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD47Q08722 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD47Q08722 AL445209.1-201ENST00000607269 3491 ntBASIC13.54□□□□□ -0.24
CD47Q08722 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.54□□□□□ -0.24
CD47Q08722 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.53□□□□□ -0.24
CD47Q08722 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CD47Q08722 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.53□□□□□ -0.24
CD47Q08722 AC087499.6-201ENST00000411576 835 ntBASIC13.53□□□□□ -0.24
CD47Q08722 SOCS2P1-201ENST00000417727 557 ntBASIC13.53□□□□□ -0.24
CD47Q08722 NUS1P3-201ENST00000423502 862 ntBASIC13.53□□□□□ -0.24
CD47Q08722 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.53□□□□□ -0.24
CD47Q08722 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 AP001582.1-201ENST00000525856 295 ntBASIC13.53□□□□□ -0.24
CD47Q08722 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.53□□□□□ -0.24
CD47Q08722 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 MIR8072-201ENST00000614241 80 ntBASIC13.53□□□□□ -0.24
CD47Q08722 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
CD47Q08722 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD47Q08722 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CD47Q08722 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.52□□□□□ -0.24
CD47Q08722 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.52□□□□□ -0.24
CD47Q08722 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD47Q08722 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD47Q08722 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms