Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 AC011742.3-201ENST00000439053 820 ntBASIC13.92□□□□□ -0.18
VSX2P58304 TPT1P11-201ENST00000458482 498 ntBASIC13.92□□□□□ -0.18
VSX2P58304 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 MARK2P5-201ENST00000507649 634 ntBASIC13.92□□□□□ -0.18
VSX2P58304 AC022217.1-201ENST00000521069 738 ntBASIC13.92□□□□□ -0.18
VSX2P58304 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.92□□□□□ -0.18
VSX2P58304 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.92□□□□□ -0.18
VSX2P58304 NDUFV2P1-201ENST00000596415 907 ntBASIC13.92□□□□□ -0.18
VSX2P58304 AP000346.4-201ENST00000614827 381 ntBASIC13.92□□□□□ -0.18
VSX2P58304 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VSX2P58304 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
VSX2P58304 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.92□□□□□ -0.18
VSX2P58304 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.92□□□□□ -0.18
VSX2P58304 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.92□□□□□ -0.18
VSX2P58304 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.92□□□□□ -0.18
VSX2P58304 AP001267.2-201ENST00000532619 2086 ntBASIC13.92□□□□□ -0.18
VSX2P58304 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 AC005912.2-201ENST00000619492 2400 ntBASIC13.92□□□□□ -0.18
VSX2P58304 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VSX2P58304 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.91□□□□□ -0.18
VSX2P58304 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 AL133338.1-201ENST00000565695 1517 ntBASIC13.91□□□□□ -0.18
VSX2P58304 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 AC232323.1-201ENST00000540724 2099 ntBASIC13.91□□□□□ -0.18
VSX2P58304 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 CALR4P-201ENST00000431943 946 ntBASIC13.91□□□□□ -0.18
VSX2P58304 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 ACTG1P17-201ENST00000558391 1119 ntBASIC13.91□□□□□ -0.18
VSX2P58304 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.91□□□□□ -0.18
VSX2P58304 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 AC026740.1-201ENST00000607068 791 ntBASIC13.91□□□□□ -0.18
VSX2P58304 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 AC097359.2-201ENST00000604992 2389 ntBASIC13.91□□□□□ -0.18
VSX2P58304 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.91□□□□□ -0.18
VSX2P58304 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VSX2P58304 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VSX2P58304 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
VSX2P58304 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.9□□□□□ -0.18
VSX2P58304 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.9□□□□□ -0.18
VSX2P58304 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VSX2P58304 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VSX2P58304 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VSX2P58304 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms