Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SUMO3P55854 MIR6869-201ENST00000619434 62 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.09□□□□□ -0.31
SUMO3P55854 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 AC007952.5-201ENST00000572818 1486 ntBASIC13.09□□□□□ -0.31
SUMO3P55854 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SUMO3P55854 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.09□□□□□ -0.31
SUMO3P55854 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.09□□□□□ -0.31
SUMO3P55854 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.08□□□□□ -0.31
SUMO3P55854 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SUMO3P55854 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
SUMO3P55854 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SUMO3P55854 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SUMO3P55854 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SUMO3P55854 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 FAM86MP-201ENST00000340703 885 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 TSPY25P-201ENST00000429463 745 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 AC092580.1-201ENST00000433998 658 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 AP001258.2-201ENST00000529891 490 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 MIR3188-201ENST00000583494 85 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 AL157813.1-201ENST00000612996 587 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.08□□□□□ -0.32
SUMO3P55854 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 AC100757.4-201ENST00000626934 759 ntBASIC13.08□□□□□ -0.32
SUMO3P55854 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.08□□□□□ -0.32
SUMO3P55854 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.08□□□□□ -0.32
SUMO3P55854 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SUMO3P55854 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 AP002353.1-201ENST00000528257 1599 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.07□□□□□ -0.32
SUMO3P55854 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SUMO3P55854 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SUMO3P55854 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SUMO3P55854 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SUMO3P55854 AC103592.1-201ENST00000394513 664 ntBASIC13.07□□□□□ -0.32
SUMO3P55854 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms