Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBP50607 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBP50607 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 RN7SKP214-201ENST00000364208 315 ntBASIC15.3■□□□□ 0.04
TUBP50607 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBP50607 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBP50607 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBP50607 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TUBP50607 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.3■□□□□ 0.04
TUBP50607 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBP50607 RN7SL774P-201ENST00000577467 290 ntBASIC15.3■□□□□ 0.04
TUBP50607 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.3■□□□□ 0.04
TUBP50607 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TUBP50607 AC133540.1-201ENST00000620845 1019 ntBASIC15.3■□□□□ 0.04
TUBP50607 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TUBP50607 PTENP1-202ENST00000532280 3996 ntBASIC15.3■□□□□ 0.04
TUBP50607 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TUBP50607 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBP50607 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 AL354702.1-201ENST00000442006 1960 ntBASIC15.29■□□□□ 0.04
TUBP50607 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBP50607 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TUBP50607 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.29■□□□□ 0.04
TUBP50607 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 RCC2P8-201ENST00000502779 1035 ntBASIC15.29■□□□□ 0.04
TUBP50607 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 AL606495.2-201ENST00000605867 535 ntBASIC15.29■□□□□ 0.04
TUBP50607 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 AC136759.1-202ENST00000530858 2194 ntBASIC15.29■□□□□ 0.04
TUBP50607 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.29■□□□□ 0.04
TUBP50607 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.29■□□□□ 0.04
TUBP50607 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TUBP50607 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms