Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNNI2P48788 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TNNI2P48788 LAP3P2-201ENST00000454686 1454 ntBASIC17.12■□□□□ 0.33
TNNI2P48788 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TNNI2P48788 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.11■□□□□ 0.33
TNNI2P48788 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNNI2P48788 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.11■□□□□ 0.33
TNNI2P48788 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
TNNI2P48788 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TNNI2P48788 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
TNNI2P48788 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TNNI2P48788 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TNNI2P48788 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.11■□□□□ 0.33
TNNI2P48788 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.11■□□□□ 0.33
TNNI2P48788 AC098934.1-203ENST00000442868 1262 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 AC005586.2-201ENST00000563946 837 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.11■□□□□ 0.33
TNNI2P48788 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.11■□□□□ 0.33
TNNI2P48788 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.11■□□□□ 0.33
TNNI2P48788 AC140113.1-201ENST00000603467 169 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 MIR6756-201ENST00000616240 63 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 AC127024.7-201ENST00000625101 200 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TNNI2P48788 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TNNI2P48788 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 AC006372.4-201ENST00000624122 1543 ntBASIC17.11■□□□□ 0.33
TNNI2P48788 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TNNI2P48788 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 IL9RP3-201ENST00000442856 1674 ntBASIC17.1■□□□□ 0.33
TNNI2P48788 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 BRD7P5-201ENST00000299197 1822 ntBASIC17.1■□□□□ 0.33
TNNI2P48788 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.1■□□□□ 0.33
TNNI2P48788 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.1■□□□□ 0.33
TNNI2P48788 OR8T1P-201ENST00000421347 918 ntBASIC17.1■□□□□ 0.33
TNNI2P48788 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.1■□□□□ 0.33
TNNI2P48788 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 AC084752.1-201ENST00000509766 622 ntBASIC17.1■□□□□ 0.33
TNNI2P48788 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.1■□□□□ 0.33
TNNI2P48788 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 AC005041.3-201ENST00000606287 649 ntBASIC17.1■□□□□ 0.33
TNNI2P48788 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TNNI2P48788 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TNNI2P48788 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNNI2P48788 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.1■□□□□ 0.33
TNNI2P48788 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
TNNI2P48788 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms