Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SOX2P48431 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SOX2P48431 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.84□□□□□ -0.35
SOX2P48431 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 GCOM2-201ENST00000509133 1104 ntBASIC12.84□□□□□ -0.35
SOX2P48431 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.84□□□□□ -0.35
SOX2P48431 RRP7BP-205ENST00000566851 833 ntBASIC12.84□□□□□ -0.35
SOX2P48431 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.84□□□□□ -0.35
SOX2P48431 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.84□□□□□ -0.35
SOX2P48431 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SOX2P48431 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.84□□□□□ -0.35
SOX2P48431 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.84□□□□□ -0.35
SOX2P48431 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SOX2P48431 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SOX2P48431 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.83□□□□□ -0.35
SOX2P48431 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.83□□□□□ -0.35
SOX2P48431 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SOX2P48431 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SOX2P48431 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.83□□□□□ -0.36
SOX2P48431 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 AC139712.1-201ENST00000378256 1875 ntBASIC12.83□□□□□ -0.36
SOX2P48431 AC020910.5-201ENST00000623668 1865 ntBASIC12.83□□□□□ -0.36
SOX2P48431 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 RN7SKP230-201ENST00000365642 335 ntBASIC12.83□□□□□ -0.36
SOX2P48431 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SOX2P48431 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.83□□□□□ -0.36
SOX2P48431 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.83□□□□□ -0.36
SOX2P48431 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.83□□□□□ -0.36
SOX2P48431 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.83□□□□□ -0.36
SOX2P48431 SORD2P-201ENST00000558556 1069 ntBASIC12.83□□□□□ -0.36
SOX2P48431 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.83□□□□□ -0.36
SOX2P48431 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.83□□□□□ -0.36
SOX2P48431 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.83□□□□□ -0.36
SOX2P48431 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.83□□□□□ -0.36
SOX2P48431 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SOX2P48431 AC020658.7-201ENST00000624274 2442 ntBASIC12.83□□□□□ -0.36
SOX2P48431 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SOX2P48431 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms