Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 LINC01230-201ENST00000625222 3017 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 AC004899.1-201ENST00000424687 1714 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 USP17L6P-201ENST00000382470 1197 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.11□□□□□ -0.31
APOBEC1P41238 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 RPL18P13-201ENST00000478088 569 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.11□□□□□ -0.31
APOBEC1P41238 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 AC003686.1-201ENST00000550956 1034 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
APOBEC1P41238 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.11□□□□□ -0.31
APOBEC1P41238 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 CYP4F23P-201ENST00000593402 1579 ntBASIC13.11□□□□□ -0.31
APOBEC1P41238 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.11□□□□□ -0.31
APOBEC1P41238 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APOBEC1P41238 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
APOBEC1P41238 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APOBEC1P41238 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOBEC1P41238 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.1□□□□□ -0.31
APOBEC1P41238 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APOBEC1P41238 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.1□□□□□ -0.31
APOBEC1P41238 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.1□□□□□ -0.31
APOBEC1P41238 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.1□□□□□ -0.31
APOBEC1P41238 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.1□□□□□ -0.31
APOBEC1P41238 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC140658.4-201ENST00000561990 352 ntBASIC13.1□□□□□ -0.31
APOBEC1P41238 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 AC005695.3-201ENST00000614522 232 ntBASIC13.1□□□□□ -0.31
APOBEC1P41238 AC090386.2-201ENST00000623010 1039 ntBASIC13.1□□□□□ -0.31
APOBEC1P41238 AC004923.1-202ENST00000642106 209 ntBASIC13.1□□□□□ -0.31
APOBEC1P41238 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.1□□□□□ -0.31
APOBEC1P41238 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
APOBEC1P41238 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
APOBEC1P41238 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOBEC1P41238 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.1□□□□□ -0.31
APOBEC1P41238 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms