Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL4P13236 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CCL4P13236 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 CICP14-201ENST00000629111 2732 ntBASIC13.54□□□□□ -0.24
CCL4P13236 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CCL4P13236 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 AC006987.1-201ENST00000413610 527 ntBASIC13.54□□□□□ -0.24
CCL4P13236 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 RNA5SP406-201ENST00000516106 112 ntBASIC13.54□□□□□ -0.24
CCL4P13236 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL4P13236 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL4P13236 AC141586.1-203ENST00000567242 366 ntBASIC13.54□□□□□ -0.24
CCL4P13236 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 AC002044.2-201ENST00000624910 970 ntBASIC13.54□□□□□ -0.24
CCL4P13236 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.54□□□□□ -0.24
CCL4P13236 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL4P13236 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.54□□□□□ -0.24
CCL4P13236 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.54□□□□□ -0.24
CCL4P13236 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CCL4P13236 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CCL4P13236 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL4P13236 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CCL4P13236 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL4P13236 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
CCL4P13236 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 AC005740.1-201ENST00000515639 522 ntBASIC13.53□□□□□ -0.24
CCL4P13236 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 AC104506.1-201ENST00000609247 429 ntBASIC13.53□□□□□ -0.24
CCL4P13236 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 AC138466.4-201ENST00000623965 852 ntBASIC13.53□□□□□ -0.24
CCL4P13236 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.53□□□□□ -0.24
CCL4P13236 AC064801.2-201ENST00000625052 1303 ntBASIC13.53□□□□□ -0.24
CCL4P13236 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
CCL4P13236 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCL4P13236 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CCL4P13236 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCL4P13236 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms