Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.9□□□□□ -0.5
DEFA4P12838 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.9□□□□□ -0.5
DEFA4P12838 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
DEFA4P12838 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
DEFA4P12838 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
DEFA4P12838 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
DEFA4P12838 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.9□□□□□ -0.51
DEFA4P12838 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
DEFA4P12838 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
DEFA4P12838 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 AL365181.3-201ENST00000605886 3222 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
DEFA4P12838 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 FAM90A12P-201ENST00000519497 2375 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 FAM90A24P-201ENST00000520792 2369 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 RNU1-114P-201ENST00000365297 166 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
DEFA4P12838 PIN1P1-201ENST00000412108 996 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 KLF2P2-201ENST00000416807 1039 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.89□□□□□ -0.51
DEFA4P12838 AC124283.3-201ENST00000570869 594 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.89□□□□□ -0.51
DEFA4P12838 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
DEFA4P12838 AL096865.1-201ENST00000606796 927 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC11.89□□□□□ -0.51
DEFA4P12838 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 CU634019.7-201ENST00000624153 1185 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 FP236241.2-201ENST00000624906 1185 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 AL603764.1-201ENST00000636452 321 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 PRSS30P-206ENST00000641773 873 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.89□□□□□ -0.51
DEFA4P12838 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
DEFA4P12838 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.89□□□□□ -0.51
DEFA4P12838 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 AL359183.1-201ENST00000623796 2132 ntBASIC11.89□□□□□ -0.51
DEFA4P12838 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
DEFA4P12838 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms