Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC073548.1-201ENST00000624088 1882 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 AC138969.2-201ENST00000532739 9932 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
BCKDHAP12694 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
BCKDHAP12694 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.87□□□□□ -0.19
BCKDHAP12694 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 TMEM14DP-201ENST00000422205 345 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 INE1-201ENST00000456273 945 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.87□□□□□ -0.19
BCKDHAP12694 BTNL10-201ENST00000595971 695 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
BCKDHAP12694 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
BCKDHAP12694 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
BCKDHAP12694 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.87□□□□□ -0.19
BCKDHAP12694 KRT8P4-201ENST00000509735 1454 ntBASIC13.87□□□□□ -0.19
BCKDHAP12694 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
BCKDHAP12694 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 AC010141.1-201ENST00000411585 623 ntBASIC13.86□□□□□ -0.19
BCKDHAP12694 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.86□□□□□ -0.19
BCKDHAP12694 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 TTTY23B-201ENST00000442790 549 ntBASIC13.86□□□□□ -0.19
BCKDHAP12694 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 AC007551.1-201ENST00000457394 519 ntBASIC13.86□□□□□ -0.19
BCKDHAP12694 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
BCKDHAP12694 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 KRT90P-201ENST00000549264 1064 ntBASIC13.86□□□□□ -0.19
BCKDHAP12694 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.86□□□□□ -0.19
BCKDHAP12694 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.86□□□□□ -0.19
BCKDHAP12694 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.86□□□□□ -0.19
BCKDHAP12694 ZACNP1-201ENST00000612259 710 ntBASIC13.86□□□□□ -0.19
BCKDHAP12694 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
BCKDHAP12694 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
BCKDHAP12694 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
BCKDHAP12694 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.86□□□□□ -0.19
BCKDHAP12694 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
BCKDHAP12694 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms