Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GCOM2-201ENST00000509133 1104 ntBASIC16.07■□□□□ 0.16
TPM1P09493 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 AC023310.3-201ENST00000557027 670 ntBASIC16.07■□□□□ 0.16
TPM1P09493 SORD2P-201ENST00000558556 1069 ntBASIC16.07■□□□□ 0.16
TPM1P09493 AC100756.1-201ENST00000562736 682 ntBASIC16.07■□□□□ 0.16
TPM1P09493 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM1P09493 AC138749.3-201ENST00000567691 622 ntBASIC16.07■□□□□ 0.16
TPM1P09493 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
TPM1P09493 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 AC116165.1-201ENST00000611806 668 ntBASIC16.07■□□□□ 0.16
TPM1P09493 AL390754.1-201ENST00000619088 582 ntBASIC16.07■□□□□ 0.16
TPM1P09493 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM1P09493 AL138725.1-201ENST00000407347 1314 ntBASIC16.07■□□□□ 0.16
TPM1P09493 TUBB8P4-201ENST00000511806 1324 ntBASIC16.07■□□□□ 0.16
TPM1P09493 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TPM1P09493 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 AC068760.1-201ENST00000493579 1953 ntBASIC16.07■□□□□ 0.16
TPM1P09493 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TPM1P09493 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM1P09493 Z82170.1-201ENST00000625081 3192 ntBASIC16.07■□□□□ 0.16
TPM1P09493 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM1P09493 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TPM1P09493 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
TPM1P09493 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TPM1P09493 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 AC004241.5-201ENST00000623870 2448 ntBASIC16.06■□□□□ 0.16
TPM1P09493 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM1P09493 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 KRT18P25-201ENST00000508931 1278 ntBASIC16.06■□□□□ 0.16
TPM1P09493 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.06■□□□□ 0.16
TPM1P09493 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM1P09493 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.06■□□□□ 0.16
TPM1P09493 AP005019.2-201ENST00000615104 511 ntBASIC16.06■□□□□ 0.16
TPM1P09493 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM1P09493 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPM1P09493 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM1P09493 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM1P09493 AC139712.1-201ENST00000378256 1875 ntBASIC16.05■□□□□ 0.16
TPM1P09493 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TPM1P09493 PID1-202ENST00000392054 2745 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM1P09493 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM1P09493 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TPM1P09493 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM1P09493 AP000347.1-202ENST00000435868 847 ntBASIC16.05■□□□□ 0.16
TPM1P09493 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM1P09493 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 FO681548.1-201ENST00000455617 1132 ntBASIC16.05■□□□□ 0.16
TPM1P09493 AL512638.1-201ENST00000457493 794 ntBASIC16.05■□□□□ 0.16
TPM1P09493 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM1P09493 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM1P09493 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM1P09493 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM1P09493 AC138761.1-201ENST00000584393 385 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms