Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HLA-DOAP06340 AC138701.2-201ENST00000553634 226 ntBASIC16.98■□□□□ 0.31
HLA-DOAP06340 AP003419.4-201ENST00000616071 517 ntBASIC16.98■□□□□ 0.31
HLA-DOAP06340 AC007326.2-201ENST00000624224 7579 ntBASIC16.98■□□□□ 0.31
HLA-DOAP06340 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HLA-DOAP06340 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DOAP06340 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HLA-DOAP06340 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DOAP06340 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DOAP06340 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HLA-DOAP06340 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 TEKT4P2-202ENST00000559466 1312 ntBASIC16.97■□□□□ 0.31
HLA-DOAP06340 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 RPL18AP8-201ENST00000486071 528 ntBASIC16.97■□□□□ 0.31
HLA-DOAP06340 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 MIR6842-201ENST00000612539 65 ntBASIC16.97■□□□□ 0.31
HLA-DOAP06340 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HLA-DOAP06340 INTS4P1-203ENST00000641008 3683 ntBASIC16.97■□□□□ 0.31
HLA-DOAP06340 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
HLA-DOAP06340 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MRPL22P1-201ENST00000505398 616 ntBASIC16.96■□□□□ 0.31
HLA-DOAP06340 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 DNM1P30-201ENST00000563586 452 ntBASIC16.96■□□□□ 0.31
HLA-DOAP06340 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.96■□□□□ 0.31
HLA-DOAP06340 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HLA-DOAP06340 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.96■□□□□ 0.3
HLA-DOAP06340 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DOAP06340 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HLA-DOAP06340 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.96■□□□□ 0.3
HLA-DOAP06340 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.95■□□□□ 0.3
HLA-DOAP06340 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.95■□□□□ 0.3
HLA-DOAP06340 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HLA-DOAP06340 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HLA-DOAP06340 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HLA-DOAP06340 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DOAP06340 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HLA-DOAP06340 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms