Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MIR5091-201ENST00000578707 93 ntBASIC8.65□□□□□ -1.02
APOBP04114 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC8.65□□□□□ -1.02
APOBP04114 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC8.65□□□□□ -1.02
APOBP04114 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 PAX6-247ENST00000638965 979 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC8.65□□□□□ -1.02
APOBP04114 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
APOBP04114 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC8.65□□□□□ -1.02
APOBP04114 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC8.65□□□□□ -1.03
APOBP04114 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
APOBP04114 HSD3BP1-201ENST00000286193 1111 ntBASIC8.65□□□□□ -1.03
APOBP04114 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
APOBP04114 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC8.65□□□□□ -1.03
APOBP04114 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC8.65□□□□□ -1.03
APOBP04114 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC8.65□□□□□ -1.03
APOBP04114 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
APOBP04114 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
APOBP04114 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
APOBP04114 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC8.65□□□□□ -1.03
APOBP04114 DDC-204ENST00000426377 1700 ntTSL 3 BASIC8.65□□□□□ -1.03
APOBP04114 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
APOBP04114 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 MIR193A-201ENST00000384882 88 ntBASIC8.64□□□□□ -1.03
APOBP04114 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 PGK1P2-201ENST00000431702 1214 ntBASIC8.64□□□□□ -1.03
APOBP04114 AC131235.2-201ENST00000445553 1057 ntBASIC8.64□□□□□ -1.03
APOBP04114 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 MIR5193-201ENST00000584510 109 ntBASIC8.64□□□□□ -1.03
APOBP04114 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
APOBP04114 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 PPP1R2P10-201ENST00000393023 595 ntBASIC8.64□□□□□ -1.03
APOBP04114 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC8.64□□□□□ -1.03
APOBP04114 RN7SL351P-201ENST00000469306 248 ntBASIC8.64□□□□□ -1.03
APOBP04114 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
APOBP04114 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 AJ011931.1-201ENST00000618749 2492 ntBASIC8.64□□□□□ -1.03
APOBP04114 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 SNU13-204ENST00000402458 462 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 AC023051.2-201ENST00000541141 460 ntBASIC8.64□□□□□ -1.03
APOBP04114 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 AC010202.1-201ENST00000551181 405 ntBASIC8.64□□□□□ -1.03
APOBP04114 ALOX12P1-201ENST00000579299 1229 ntBASIC8.64□□□□□ -1.03
APOBP04114 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
APOBP04114 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC8.64□□□□□ -1.03
APOBP04114 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 U3.41-201ENST00000408711 219 ntBASIC8.64□□□□□ -1.03
APOBP04114 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 AC079250.1-201ENST00000456046 531 ntBASIC8.64□□□□□ -1.03
APOBP04114 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC8.64□□□□□ -1.03
APOBP04114 RN7SL789P-201ENST00000478944 293 ntBASIC8.64□□□□□ -1.03
APOBP04114 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC8.64□□□□□ -1.03
APOBP04114 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
APOBP04114 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms