Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
IFNA1P01562 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 MIR346-201ENST00000362234 95 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.51□□□□□ -0.57
IFNA1P01562 AC074338.1-201ENST00000416825 156 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 HNRNPDP1-201ENST00000439535 754 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.51□□□□□ -0.57
IFNA1P01562 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 KRT18P21-201ENST00000515767 1272 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.51□□□□□ -0.57
IFNA1P01562 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 KRT8P23-201ENST00000560090 1207 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 PRELID1P1-202ENST00000567272 903 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.51□□□□□ -0.57
IFNA1P01562 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 C17orf51-201ENST00000391411 7914 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 CICP1-201ENST00000416803 2410 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
IFNA1P01562 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 LINC00567-201ENST00000569854 3409 ntBASIC11.51□□□□□ -0.57
IFNA1P01562 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.51□□□□□ -0.57
IFNA1P01562 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
IFNA1P01562 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
IFNA1P01562 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.5□□□□□ -0.57
IFNA1P01562 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 AC106818.1-201ENST00000623223 3242 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 AL671277.1-201ENST00000429656 993 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 KRT18P67-201ENST00000432816 1264 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 FAM197Y8-203ENST00000450145 560 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.5□□□□□ -0.57
IFNA1P01562 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.5□□□□□ -0.57
IFNA1P01562 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.5□□□□□ -0.57
IFNA1P01562 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.5□□□□□ -0.57
IFNA1P01562 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 RARRES2P9-201ENST00000565168 469 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 AC105021.1-202ENST00000570572 669 ntBASIC11.5□□□□□ -0.57
IFNA1P01562 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.5□□□□□ -0.57
IFNA1P01562 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.5□□□□□ -0.57
IFNA1P01562 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
IFNA1P01562 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms