Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF9O43307 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF9O43307 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
ARHGEF9O43307 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF9O43307 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ARHGEF9O43307 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.62□□□□□ -0.23
ARHGEF9O43307 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AL158070.2-201ENST00000623713 1621 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC092053.3-201ENST00000641308 4975 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AL138799.1-201ENST00000448213 1675 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC119751.2-201ENST00000504529 210 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC010319.3-201ENST00000597028 470 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC233724.13-201ENST00000598383 410 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC068587.10-201ENST00000641210 219 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 AC089987.1-201ENST00000551654 2209 ntBASIC13.61□□□□□ -0.23
ARHGEF9O43307 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF9O43307 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF9O43307 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 PTPRVP-205ENST00000641549 5067 ntBASIC13.6□□□□□ -0.23
ARHGEF9O43307 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF9O43307 AL162726.2-201ENST00000438986 1017 ntBASIC13.6□□□□□ -0.23
ARHGEF9O43307 VDAC1P7-201ENST00000462417 847 ntBASIC13.6□□□□□ -0.23
ARHGEF9O43307 AC026410.3-201ENST00000514280 936 ntBASIC13.6□□□□□ -0.23
ARHGEF9O43307 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF9O43307 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms