Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 USP17L6P-201ENST00000382470 1197 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.5■□□□□ 0.07
FOXN3O00409 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXN3O00409 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.5■□□□□ 0.07
FOXN3O00409 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 AL160314.3-201ENST00000556041 767 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 AP005482.1-201ENST00000563722 1273 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 AC005962.1-201ENST00000584100 773 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 EEF1DP1-201ENST00000585891 896 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 COX11-210ENST00000639671 696 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 AC144522.1-201ENST00000625111 1658 ntBASIC15.5■□□□□ 0.07
FOXN3O00409 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FOXN3O00409 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FOXN3O00409 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FOXN3O00409 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 CYP4F23P-201ENST00000593402 1579 ntBASIC15.49■□□□□ 0.07
FOXN3O00409 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXN3O00409 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 YBX1P6-201ENST00000442962 1002 ntBASIC15.49■□□□□ 0.07
FOXN3O00409 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 GPR53P-205ENST00000457298 1084 ntBASIC15.49■□□□□ 0.07
FOXN3O00409 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 AC009884.2-201ENST00000603110 324 ntBASIC15.49■□□□□ 0.07
FOXN3O00409 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXN3O00409 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXN3O00409 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXN3O00409 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXN3O00409 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
FOXN3O00409 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXN3O00409 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXN3O00409 LAP3P2-201ENST00000454686 1454 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms