Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC188H7C350 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC188H7C350 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.1■□□□□ 0.01
CCDC188H7C350 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 AC068587.3-201ENST00000526613 355 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CCDC188H7C350 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.1■□□□□ 0.01
CCDC188H7C350 CLUHP6-201ENST00000580789 941 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 TMEM261P1-201ENST00000604899 340 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 ENPP7P14-201ENST00000621765 1040 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 AC019294.4-201ENST00000561777 2905 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC188H7C350 AP002761.4-201ENST00000565433 3361 ntBASIC15.1■□□□□ 0.01
CCDC188H7C350 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.1■□□□□ 0.01
CCDC188H7C350 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.1■□□□□ 0.01
CCDC188H7C350 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CCDC188H7C350 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.09■□□□□ 0.01
CCDC188H7C350 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 PDIA3P1-201ENST00000471856 1510 ntBASIC15.09■□□□□ 0.01
CCDC188H7C350 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC188H7C350 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.09■□□□□ 0.01
CCDC188H7C350 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC188H7C350 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC188H7C350 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC011495.1-201ENST00000498085 584 ntBASIC15.09■□□□□ 0.01
CCDC188H7C350 AL391280.1-201ENST00000506969 1062 ntBASIC15.09■□□□□ 0.01
CCDC188H7C350 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.09■□□□□ 0.01
CCDC188H7C350 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC188H7C350 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC188H7C350 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CCDC188H7C350 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC188H7C350 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC188H7C350 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC188H7C350 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC188H7C350 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC188H7C350 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms