Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 TSSK5P-201ENST00000423978 907 ntBASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 AC025678.2-201ENST00000562061 970 ntBASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 BRI3BPP1-201ENST00000594224 787 ntBASIC12.45□□□□□ -0.42
TMEM235A6NFC5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 AL390955.2-201ENST00000603032 514 ntBASIC12.45□□□□□ -0.42
TMEM235A6NFC5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 AC004840.1-201ENST00000636359 365 ntBASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM235A6NFC5 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC005014.1-201ENST00000432006 2976 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 PCDHB18P-202ENST00000526308 3197 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 C1QBPP1-201ENST00000400117 770 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC134915.1-201ENST00000426461 574 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC241585.1-201ENST00000433527 519 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 FO681548.1-201ENST00000455617 1132 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC004449.1-201ENST00000564240 433 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC104794.3-201ENST00000566840 1248 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AC008738.7-201ENST00000609744 511 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 AP001002.3-201ENST00000623482 206 ntBASIC12.44□□□□□ -0.42
TMEM235A6NFC5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM235A6NFC5 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms