Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 INTS4P1-203ENST00000641008 3683 ntBASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 AL354702.1-201ENST00000442006 1960 ntBASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TBC1D3FA6NER0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 MYADML-201ENST00000474610 2147 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 KRT17P5-201ENST00000332088 839 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AL512430.1-201ENST00000392575 860 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 RPS9P1-201ENST00000419943 583 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC078991.1-201ENST00000437297 610 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 RN7SL181P-201ENST00000462921 277 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 RN7SL277P-201ENST00000481521 288 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC092171.5-201ENST00000608012 942 ntBASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TBC1D3FA6NER0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 MTHFR-210ENST00000641407 2387 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 MIR557-201ENST00000385239 98 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.4□□□□□ -0.1
TBC1D3FA6NER0 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms