Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC009093.2-202ENST00000620513 2079 ntBASIC12.65□□□□□ -0.39
SHISA3A0PJX4 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.65□□□□□ -0.39
SHISA3A0PJX4 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ACTBP8-201ENST00000403258 1108 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC254562.1-201ENST00000417586 456 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ARSEP1-201ENST00000420443 635 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AK2P2-201ENST00000439142 405 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 DNAJB3-202ENST00000449667 1266 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 KLF2P3-201ENST00000451977 1087 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 RPL13AP25-201ENST00000484130 612 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC140878.1-201ENST00000565277 250 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC124283.3-201ENST00000570869 594 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 AC010970.1-201ENST00000445125 1848 ntBASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SHISA3A0PJX4 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AL021155.1-201ENST00000438808 2637 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 Z98257.2-202ENST00000641138 1548 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AC108024.1-201ENST00000626286 1721 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 CNN2P2-201ENST00000443536 909 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 PUDPP3-201ENST00000445368 636 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 CNN2P3-201ENST00000450201 906 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
SHISA3A0PJX4 AC135586.1-201ENST00000539323 574 ntBASIC12.63□□□□□ -0.39
SHISA3A0PJX4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms