Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC079781.5-202ENST00000641784 3743 ntBASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AGER-203ENST00000375065 665 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FKBP4P6-201ENST00000457486 1332 ntBASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C2orf69P2-201ENST00000562032 1123 ntBASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL096828.3-201ENST00000615354 462 ntBASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 INE2-201ENST00000630399 1874 ntBASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC090505.1-201ENST00000430515 1834 ntBASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CLUHP2-201ENST00000426660 1303 ntBASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ATP6V0CP2-201ENST00000469409 207 ntBASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.72□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms