Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC097359.3-201ENST00000603982 1210 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ITIH1-201ENST00000273283 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC008158.1-201ENST00000578759 3668 ntBASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ADGRG5-202ENST00000349457 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 MX1-201ENST00000288383 2733 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 C2-211ENST00000469372 1906 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 IGSF9-202ENST00000368094 4044 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 BIVM-201ENST00000257336 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
LINC01558Q9Y6Z2 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AC007336.3-201ENST00000623886 2160 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 LRRCC1-201ENST00000360375 3813 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 HDAC7-230ENST00000552960 3216 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AC092338.2-201ENST00000568827 1415 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AC138749.1-201ENST00000567652 2472 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 CCDC74BP1-201ENST00000508880 1123 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 NEK4P2-201ENST00000580004 1012 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AL139246.5-201ENST00000606645 996 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 AL023875.1-201ENST00000640777 796 ntBASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC7.37□□□□□ -1.23
LINC01558Q9Y6Z2 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms