Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTDP1Q9Y5B0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 BANF1P3-201ENST00000412556 261 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AC093752.3-201ENST00000567343 901 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 PHBP15-201ENST00000574228 665 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AC021016.3-201ENST00000608367 477 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 MIR7845-201ENST00000618396 99 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 COX6A1P2-201ENST00000620597 330 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 AJ011931.1-201ENST00000618749 2492 ntBASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTDP1Q9Y5B0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AC018529.2-202ENST00000611482 3087 ntBASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 RPSAP15-201ENST00000448168 861 ntBASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AC140658.4-201ENST00000561990 352 ntBASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 AC007326.1-201ENST00000604539 458 ntBASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTDP1Q9Y5B0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms