Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 CNN2P8-201ENST00000421872 913 ntBASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC007551.1-201ENST00000457394 519 ntBASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC138951.2-201ENST00000623455 1161 ntBASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC006453.4-201ENST00000636949 1252 ntBASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC023794.5-201ENST00000564380 2157 ntBASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RNF11Q9Y3C5 AC114271.1-201ENST00000612689 2813 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 CU639417.3-201ENST00000624240 1404 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AC073413.1-201ENST00000603927 732 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 AL354989.2-201ENST00000435838 1540 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 TCAM1P-207ENST00000485295 1537 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 KRT8P28-201ENST00000433288 1390 ntBASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RNF11Q9Y3C5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms