Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
RCL1Q9Y2P8 PCDHA6-201ENST00000378126 3267 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AC005014.1-201ENST00000432006 2976 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 SPDYE7P-202ENST00000420373 878 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 HLA-V-204ENST00000476601 1289 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AC131206.1-201ENST00000538078 1211 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TIMM17BP1-201ENST00000545713 516 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 SORD2P-201ENST00000558556 1069 ntBASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RCL1Q9Y2P8 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 MKRN5P-201ENST00000445263 1467 ntBASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms