Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AC015909.3-201ENST00000572855 1794 ntBASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CLCF1Q9UBD9 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TBC1D3J-201ENST00000620719 1426 ntBASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 COG4-212ENST00000564653 590 ntTSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC026803.1-201ENST00000569130 274 ntBASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 PHBP15-201ENST00000574228 665 ntBASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AL022334.2-201ENST00000610000 484 ntBASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC090386.2-201ENST00000623010 1039 ntBASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CLCF1Q9UBD9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 AP002353.1-201ENST00000528257 1599 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 LAP3P2-201ENST00000454686 1454 ntBASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLCF1Q9UBD9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms