Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 OR7E109P-201ENST00000445529 855 ntBASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AC009078.2-202ENST00000463353 338 ntBASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AP000720.1-201ENST00000625091 483 ntBASIC17.42■□□□□ 0.38
RTN4Q9NQC3 FAM13C-202ENST00000435852 2088 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 AC018445.4-201ENST00000624066 2291 ntBASIC17.42■□□□□ 0.38
RTN4Q9NQC3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4Q9NQC3 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC240504.1-201ENST00000395709 845 ntBASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC142381.1-201ENST00000426099 345 ntBASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC112191.1-201ENST00000523689 701 ntBASIC17.41■□□□□ 0.38
RTN4Q9NQC3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4Q9NQC3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AP003469.4-201ENST00000565617 2825 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AC004945.1-201ENST00000416738 983 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 RPS6P14-201ENST00000425165 719 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 UBE2V2P3-201ENST00000433562 437 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AC027307.2-201ENST00000591252 911 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 AC092865.6-201ENST00000642101 219 ntBASIC17.4■□□□□ 0.38
RTN4Q9NQC3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.4■□□□□ 0.38
RTN4Q9NQC3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms