Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 MIR663B-201ENST00000408361 115 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AL591846.1-201ENST00000451736 433 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 CICP12-201ENST00000455801 843 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC009955.4-201ENST00000597192 544 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AC015688.4-201ENST00000580780 1647 ntBASIC12.47□□□□□ -0.41
GCM1Q9NP62 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GCM1Q9NP62 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GCM1Q9NP62 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 FAM86MP-201ENST00000340703 885 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC092658.1-201ENST00000505836 891 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 FAM8A2P-201ENST00000528813 1142 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC103988.2-201ENST00000561804 725 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC104982.3-201ENST00000581995 514 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC132192.2-201ENST00000596206 1147 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 AC005695.3-201ENST00000614522 232 ntBASIC12.46□□□□□ -0.41
GCM1Q9NP62 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.46□□□□□ -0.41
GCM1Q9NP62 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GCM1Q9NP62 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 AL590440.2-201ENST00000641973 1595 ntBASIC12.46□□□□□ -0.42
GCM1Q9NP62 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.46□□□□□ -0.42
GCM1Q9NP62 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
GCM1Q9NP62 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms