Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 HOMER2P2-201ENST00000451621 847 ntBASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC083964.2-201ENST00000623988 2396 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 U91328.1-201ENST00000437528 223 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC119751.2-201ENST00000504529 210 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC005962.1-201ENST00000584100 773 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 AC004623.1-201ENST00000624592 2127 ntBASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RSPO3Q9BXY4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 AC007952.5-201ENST00000572818 1486 ntBASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RSPO3Q9BXY4 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms