Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 AC145285.3-201ENST00000564603 959 ntBASIC13.71□□□□□ -0.21
NR1H4Q96RI1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NR1H4Q96RI1 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 ABCD1P2-201ENST00000429313 1601 ntBASIC13.71□□□□□ -0.22
NR1H4Q96RI1 LINC01165-201ENST00000445190 1623 ntBASIC13.71□□□□□ -0.22
NR1H4Q96RI1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 AL157414.3-201ENST00000624276 1954 ntBASIC13.71□□□□□ -0.22
NR1H4Q96RI1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.71□□□□□ -0.22
NR1H4Q96RI1 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 IL9RP2-201ENST00000423948 1312 ntBASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AC099521.2-201ENST00000619354 2036 ntBASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AL590627.1-203ENST00000421194 1026 ntBASIC13.7□□□□□ -0.22
NR1H4Q96RI1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AL513190.1-201ENST00000621254 727 ntBASIC13.7□□□□□ -0.22
NR1H4Q96RI1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.7□□□□□ -0.22
NR1H4Q96RI1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms